Publications

Found 66 results
Type [ Year(Asc)]
2021
Gregory Herschlag, Seyong Lee, Jeffrey Vetter, and Amanda Randles. "Analysis of GPU Data Access Patterns on Complex Geometries for the D3Q19 Lattice Boltzmann Algorithm." IEEE Transactions on Parallel and Distributed Systems 32, no. 10 (2021): 2400-2414.
M. Vardhan, and A. Randles. "Application of physics-based flow models in cardiovascular medicine: Current practices and challenges." Biophysics Reviews 2, no. 1 (2021): 011302.
Amanda Randles, Hans-Georg Wirsching, Jamie A. Dean, Yu-Kang Cheng, Samuel Emerson, Siobhan S. Pattwell, Eric C. Holland, and Franziska Michor. "Computational modelling of perivascular-niche dynamics for the optimization of treatment schedules for glioblastoma." Nature Biomedical Engineering 5, no. 4 (2021): 346-359.
Daniel F. Puleri, Peter Balogh, and Amanda Randles. "Computational models of cancer cell transport through the microcirculation." Biomechanics and Modeling in Mechanobiology (2021).
Bradley Feiger, Adebayo Adebiyi, and Amanda Randles. "Multiscale modeling of blood flow to assess neurological complications in patients supported by venoarterial extracorporeal membrane oxygenation." Computers in Biology and Medicine 129 (2021): 104155.
Madhurima Vardhan, John Gounley, James S. Chen, Eric C. Chi, Andrew M. Kahn, Jane A. Leopold, and Amanda Randles. "Non-invasive characterization of complex coronary lesions." Scientific Reports 11, no. 1 (2021).
2020
B. Feiger, J.Gounley, D. Adler, J. Leopold, E. Draeger, R. Chaudhury, J. Ryan, G. Pathangey, K. Winarta, D. Frakes et al. "Accelerating massively parallel hemodynamic models of coarctation of the aorta using neural networks." Scientific Reports 10, no. 1 (2020): 1-13.
Michael Kaplan, Charley Kneifel, Victor Orlikowski, James Dorff, Mike Newton, Andrew Howard, Don Shin, Muath Bishawi, Simbarashe Chidyagwai, Peter Balogh et al. "Cloud Computing for COVID19: Lessons Learned from Massively Parallel Model of Ventilator Splitting." Computing in Science & Engineering 22, no. 6 (2020): 37-47.
D.F. Puleri, S. Roychowdhury, J. Ames, and A. Randles. "Computational framework to evaluate the hydrodynamics of cell scaffold geometries." In 42 Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC). IEEE 2020.
B. Feiger, A. Kochar, J. Gounley, D. Bonadonna, M. Daneshmand, and A. Randles. "Determining the Impacts of Venoarterial Extracorporeal Membrane Oxygenation on Cerebral Oxygenation using a One-Dimensional Blood Flow Simulator." Journal of Biomechanics (2020): 109707.
M. Bishawi, B. Feiger, N. Kurupassery, K.P. Economopoulos, P. Suhocki, T. Pappas, G. Truskey, and A. Randles. "Drainage Performance of a Novel Catheter Designed to Reduce Drainage Catheter Failure." Journal of Clinical and Interventional Radiology 4, no. 1 (2020): 9-15.
S. Roychowdhury, J. Gounley, and A. Randles. "Evaluating the Influence of Hemorheological Parameters on Circulating Tumor Cell Trajectory and Simulation Time." In The Platform for Advanced Scientific Computing (PASC) Conference , 1-10. Geneva, Switzerland: ACM 2020.
W. F. Hynes, M. Pepona, C. Robertson, J. Alvarado, K. Dubbin, M. Triplett, J. J. Adorno, A. Randles, and M. L. Moya. "Examining metastatic behavior within 3D bioprinted vasculature for the validation of a 3D computational flow model." Science Advances 6, no. 35 (2020): eabb3308.
Harvey Shi, Jeff Ames, and Amanda Randles. "Harvis: an interactive virtual reality tool for hemodynamic modification and simulation." Journal of Computational Science 43, no. 101091 (2020).
Marianna Pepona, Peter Balogh, Daniel F. Puleri, William F. Hynes, Claire Robertson, Karen Dubbin, Javier Alvarado, Monica L. Moya, and Amanda Randles. "Investigating the Interaction Between Circulating Tumor Cells and Local Hydrodynamics via Experiment and Simulations." Cellular and Molecular Bioengineering (2020): 14.
M. Dabagh, J. Gounley, and A. Randles. "Localization of Rolling and Firm-Adhesive Interactions Between Circulating Tumor Cells and the Microvasculature Wall." Cellular and Molecular Bioengineering 13 (2020): 141-154.
Jeff Ames, Daniel F. Puleri, Peter Balogh, John Gounley, Erik W. Draeger, and Amanda Randles. "Multi-GPU immersed boundary method hemodynamics simulations." Journal of Computational Science 44 (2020): 101153.
Lindy K. Jang, Javier A. Alvarado, Marianna Pepona, Elisa M. Wasson, Landon D. Nash, Jason M. Ortega, Amanda Randles, Duncan J. Maitland, Monica L. Moya, and William F. Hynes. "Three-dimensional bioprinting of aneurysm-bearing tissue structure for endovascular deployment of embolization coils." Biofabrication 13, no. 1 (2020): 015006.
2019
J. Cherian, M. Dabagh, V.M. Srinivasan, S. Chen, J. Johnson, A. Wakhloo, V. Gupta, J. Macho, A. Randles, and P. Kan. "Balloon-Mounted Stents for Treatment of Refractory Flow Diverting Device Wall Malapposition." Operative Neurosurgery, no. 297 (2019).
J. Gounley, E.W. Draeger, T. Oppelstrup, W.D. Krauss, J.A. Gunnels, R. Chaudhury, P. Nair, D. Frakes, J.A. Leopold, and A. Randles. "Computing the ankle-brachial index with parallel computational fluid dynamics." Journal of Biomechanics 82 (2019): 28-37.
J. Gounley, M. Vardhan, and A. Randles. "A framework for comparing vascular hemodynamics at different points in time." Computer Physics Communications 235 (2019): 1-8.
M. Dabagh, P. Nair, J. Gounley, D. Frakes, L.F. Gonzalez, and A. Randles. "Hemodynamic and morphological characteristics of a growing cerebral aneurysm." Neurosurgical Focus 47, no. 1 (2019).
J. Gounley, E.W. Draeger, and A. Randles. Immersed Boundary Method Halo Exchange in a Hemodynamics Application. In Lecture Notes in Computer Science – ICCS 2019, Edited by J. Rodrigues, P. Cardoso, A. Monteiro, R. Lam, V. Krzhizhanovskaya, M.H. Lees, J. Dongarra and P. Sloot. Vol. 11536. Cham: Springer International Publishing, 2019.
M. Vardhan, J. Gounley, S.Y. Chen, A.M. Kahn, J.A. Leopold, and A. Randles. "The importance of side branches in modeling 3D hemodynamics from angiograms for patients with coronary artery disease." Scientific Reports 9, no. 8854 (2019).
M. Vardhan, H. Shi, J. Gounley, S.Y. Chen, A. Kahn, J. Leopold, and A. Randles. "Investigating the role of VR in a simulation-based medical planning system for coronary interventions." In Medical Image Computing and Computer Assisted Interventions (MICCAI) 2019. Shenzhen, China 2019.

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