Publications

Found 81 results
Type [ Year(Asc)]
In Press
D.F. Puleri, A.X. Martin, and A. Randles. "Distributed Acceleration of Adhesive Dynamics Simulations." In EuroMPI/USA 2022. In Press.
M. Vardhan, H. Shi, D. Urick, M. Patel, J. Leopold, and A. Randles. "The role of extended reality for planning coronary artery bypass graft surgery." In IEEE Vis. Oklahoma City, OK: IEEE In Press.
2022
Simbarashe G. Chidyagwai, Madhurima Vardhan, Michael Kaplan, Reid Chamberlain, Piers Barker, and Amanda Randles. "Characterization of hemodynamics in anomalous aortic origin of coronary arteries using patient-specific modeling." Journal of Biomechanics (2022): 110919.
C. Tanade, S. Putney, and A. Randles. "Developing a Scalable Agent-Based Model of 3D Tumor Growth." In International Conference on Computational Science. London, UK: Springer, Cham 2022.
S. Roychowdhury, E.W. Draeger, and A. Randles. "Establishing metrics to quantify underlying structure in vascular red blood cell distributions." In International Conference on Computational Science. London, UK: Springer, Cham 2022.
B. Feiger, E. Lorenzana=Saldivar, C. Cooke, R. Horstmeyer, M. Bishawi, J. Doberne, G.C. Hughes, D. Ranney, S. Voigt, and A. Randles. "Evaluation of U-Net Based Architectures for Automatic Aortic Dissection Segmentation." ACM Transactions on Computing for Healthcare 3, no. 1 (2022): 15.
D. Puleri, S. Roychowdhury, P. Balogh, J. Gounley, E.W. Draeger, J. Ames, A. Adebiyi, S. Chidywagwai, B. Hernández, S. Lee et al. "High Performance Adaptive Physics Refinement to Enable Large-Scale Tracking of Cancer Cell Trajectory." In IEEE Cluster. 2022.
M. Bishawi, M. Kaplan, S. Chidyagwai, J. Cappiello, A. Cherry, D. MacLeod, K. Gall, N. Evans, M. Kim, R. Shaha et al. "Patient- and Ventilator-Specific Modeling to Drive the Use and Development of 3D Printed Devices for Rapid Ventilator Splitting During the COVID-19 Pandemic." In International Conference on Computational Science. London, UK: Springer Lecture Notes in Computer Science (LNCS) 2022.
J. Gounley, M. Vardhan, E. Draeger, P. Valero-Lara, S. Moore, and A. Randles. "Propagation pattern for moment representation of the lattice Boltzmann method." IEEE Transactions on Parallel and Distributed Systems 33, no. 3 (2022): 642-653.
Daniel F. Puleri, and Amanda Randles. "The role of adhesive receptor patterns on cell transport in complex microvessels." Biomechanics and Modeling in Mechanobiology (2022).
2021
G. Herschlag, S. Lee, J. Vetter, and A. Randles. "Analysis of GPU Data Access Patterns on Complex Geometries for the D3Q19 Lattice Boltzmann Algorithm." IEEE Transactions on Parallel and Distributed Systems 32, no. 10 (2021): 2400-2414.
M. Vardhan, and A. Randles. "Application of physics-based flow models in cardiovascular medicine: Current practices and challenges." Biophysics Reviews 2, no. 1 (2021): 011302.
A. Randles, H.-G. Wirsching, J.A. Dean, Y.K. Cheng, S. Emerson, S.S. Pattwell, E.C. Holland, and F. Michor. "Computational modelling of perivascular-niche dynamics for the optimization of treatment schedules for glioblastoma." Nature Biomedical Engineering 5, no. 4 (2021): 346-359.
Daniel F. Puleri, Peter Balogh, and Amanda Randles. "Computational models of cancer cell transport through the microcirculation." Biomechanics and Modeling in Mechanobiology 4, no. 20 (2021): 1209-1230.
P. Balogh, J. Gounley, S. Roychowdhury, and A. Randles. "A data-driven approach to modeling cancer cell mechanics during microcirculatory transport." Scientific Reports 11, no. 1 (2021).
Cyrus Tanade, Bradley Feiger, Madhurima Vardhan, James S. Chen, Jane A. Leopold, and Amanda Randles. Global Sensitivity Analysis for Clinically Validated 1D Models of Fractional Flow Reserve In 43rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)., 2021.
Xiaoqian Liu, Madhurima Vardhan, Qinrou Wen, Arpita Das, Amanda Randles, and Eric Chi. An Interpretable Machine Learning Model to Classify Coronary Bifurcation Lesions In 43rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)., 2021.
R.L.M. Bazarin, P.C. Philippi, A. Randles, and L.A. Hegele. "Moments-based method for boundary conditions in the lattice Boltzmann framework." Computers & Fluids (2021): 105142.
B. Feiger, A. Adebiyi, and A. Randles. "Multiscale modeling of blood flow to assess neurological complications in patients supported by venoarterial extracorporeal membrane oxygenation." Computers in Biology and Medicine 129 (2021): 104155.
M. Vardhan, J. Gounley, S.J. Chen, E.C. Chi, A.M. Kahn, J.A. Leopold, and A. Randles. "Non-invasive characterization of complex coronary lesions." Scientific Reports 11, no. 1 (2021).
B. Feiger, E. Lorenzana, D. Ranney, M. Bishawi, J. Doberne, A. Vekstein, S. Voigt, C. Hughes, and A. Randles. "Predicting Aneurysmal Degeneration of Type B Aortic Dissection with Computational Fluid Dynamics." In The 12th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics (ACM-BCB 2021). Virtual: ACM 2021.
2020
B. Feiger, J.Gounley, D. Adler, J. Leopold, E. Draeger, R. Chaudhury, J. Ryan, G. Pathangey, K. Winarta, D. Frakes et al. "Accelerating massively parallel hemodynamic models of coarctation of the aorta using neural networks." Scientific Reports 10, no. 1 (2020): 1-13.
Michael Kaplan, Charley Kneifel, Victor Orlikowski, James Dorff, Mike Newton, Andrew Howard, Don Shin, Muath Bishawi, Simbarashe Chidyagwai, Peter Balogh et al. "Cloud Computing for COVID19: Lessons Learned from Massively Parallel Model of Ventilator Splitting." Computing in Science & Engineering 22, no. 6 (2020): 37-47.
D.F. Puleri, S. Roychowdhury, J. Ames, and A. Randles. "Computational framework to evaluate the hydrodynamics of cell scaffold geometries." In 42 Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC). IEEE 2020.
B. Feiger, A. Kochar, J. Gounley, D. Bonadonna, M. Daneshmand, and A. Randles. "Determining the Impacts of Venoarterial Extracorporeal Membrane Oxygenation on Cerebral Oxygenation using a One-Dimensional Blood Flow Simulator." Journal of Biomechanics (2020): 109707.

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