Publications

Found 58 results
Type [ Year(Asc)]
In Press
A. Randles, H-G Wirsching, J. Dean, Y-K Cheng, S. Emerson, S.S. Pattwell, E.C. Holland, and F. Michor. "Computational modeling of the glioblastoma microenvironment identifies optimum temozolomide-radiotherapy administration schedules." Nature Biomedical Engineering (In Press).
2020
B. Feiger, J.Gounley, D. Adler, J. Leopold, E. Draeger, R. Chaudhury, J. Ryan, G. Pathangey, K. Winarta, D. Frakes et al. "Accelerating massively parallel hemodynamic models of coarctation of the aorta using neural networks." Scientific Reports 10, no. 1 (2020): 1-13.
D.F. Puleri, S. Roychowdhury, J. Ames, and A. Randles. "Computational framework to evaluate the hydrodynamics of cell scaffold geometries." In 42 Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC). IEEE 2020.
B. Feiger, A. Kochar, J. Gounley, D. Bonadonna, M. Daneshmand, and A. Randles. "Determining the Impacts of Venoarterial Extracorporeal Membrane Oxygenation on Cerebral Oxygenation using a One-Dimensional Blood Flow Simulator." Journal of Biomechanics (2020): 109707.
M. Bishawi, B. Feiger, N. Kurupassery, K.P. Economopoulos, P. Suhocki, T. Pappas, G. Truskey, and A. Randles. "Drainage Performance of a Novel Catheter Designed to Reduce Drainage Catheter Failure." Journal of Clinical and Interventional Radiology 4, no. 1 (2020): 9-15.
S. Roychowdhury, J. Gounley, and A. Randles. "Evaluating the Influence of Hemorheological Parameters on Circulating Tumor Cell Trajectory and Simulation Time." In The Platform for Advanced Scientific Computing (PASC) Conference , 1-10. Geneva, Switzerland: ACM 2020.
W. F. Hynes, M. Pepona, C. Robertson, J. Alvarado, K. Dubbin, M. Triplett, J. J. Adorno, A. Randles, and M. L. Moya. "Examining metastatic behavior within 3D bioprinted vasculature for the validation of a 3D computational flow model." Science Advances 6, no. 35 (2020): eabb3308.
Harvey Shi, Jeff Ames, and Amanda Randles. "Harvis: an interactive virtual reality tool for hemodynamic modification and simulation." Journal of Computational Science 43, no. 101091 (2020).
M. Dabagh, J. Gounley, and A. Randles. "Localization of Rolling and Firm-Adhesive Interactions Between Circulating Tumor Cells and the Microvasculature Wall." Cellular and Molecular Bioengineering 13 (2020): 141-154.
Jeff Ames, Daniel F. Puleri, Peter Balogh, John Gounley, Erik W. Draeger, and Amanda Randles. "Multi-GPU immersed boundary method hemodynamics simulations." Journal of Computational Science 44 (2020): 101153.
2019
J. Cherian, M. Dabagh, V.M. Srinivasan, S. Chen, J. Johnson, A. Wakhloo, V. Gupta, J. Macho, A. Randles, and P. Kan. "Balloon-Mounted Stents for Treatment of Refractory Flow Diverting Device Wall Malapposition." Operative Neurosurgery, no. 297 (2019).
J. Gounley, E.W. Draeger, T. Oppelstrup, W.D. Krauss, J.A. Gunnels, R. Chaudhury, P. Nair, D. Frakes, J.A. Leopold, and A. Randles. "Computing the ankle-brachial index with parallel computational fluid dynamics." Journal of Biomechanics 82 (2019): 28-37.
J. Gounley, M. Vardhan, and A. Randles. "A framework for comparing vascular hemodynamics at different points in time." Computer Physics Communications 235 (2019): 1-8.
M. Dabagh, P. Nair, J. Gounley, D. Frakes, L.F. Gonzalez, and A. Randles. "Hemodynamic and morphological characteristics of a growing cerebral aneurysm." Neurosurgical Focus 47, no. 1 (2019).
J. Gounley, E.W. Draeger, and A. Randles. Immersed Boundary Method Halo Exchange in a Hemodynamics Application. In Lecture Notes in Computer Science – ICCS 2019, Edited by J. Rodrigues, P. Cardoso, A. Monteiro, R. Lam, V. Krzhizhanovskaya, M.H. Lees, J. Dongarra and P. Sloot. Vol. 11536. Cham: Springer International Publishing, 2019.
M. Vardhan, J. Gounley, S.Y. Chen, A.M. Kahn, J.A. Leopold, and A. Randles. "The importance of side branches in modeling 3D hemodynamics from angiograms for patients with coronary artery disease." Scientific Reports 9, no. 8854 (2019).
M. Vardhan, H. Shi, J. Gounley, S.Y. Chen, A. Kahn, J. Leopold, and A. Randles. "Investigating the role of VR in a simulation-based medical planning system for coronary interventions." In Medical Image Computing and Computer Assisted Interventions (MICCAI) 2019. Shenzhen, China 2019.
J. Ames, S. Rizzi, J. Insley, S. Patel, B. Hernández, and A. Randles. "Low-Overhead In Situ Visualization Using Halo Replay." In The 9th IEEE Symposium on Large Data Analysis and Visualization. Vancouver, British Columbia, Canada : IEEE 2019.
M. Vardhan, J. Gounley, L. Hegele, E. Draeger, and A. Randles. "Moment representation in the lattice Boltzmann method on massively parallel hardware." In The International Conference for High Performance Computing, Networking, Storage, and Analysis (SC19). Denver, CO, USA : IEEE/ACM (accepted) 2019.
G. Herschlag, J. Gounley, S. Roychowdhury, E. Draeger, and A. Randles. "Multi-physics simulations of particle tracking in arterial geometries with a scalable moving window algorithm." In IEEE Cluster 2019. Albuquerque, New Mexico USA: IEEE 2019.
B. Grigoryan, S.J. Paulsen, D.C. Corbett, D.W. Sazer, C.L. Fortin, A.J. Zaita, P.T. Greenfield, N.J. Calafat, J.P. Gounley, A.H. Ta et al. "Multivascular networks and functional intravascular topologies within biocompatible hydrogels." Science 364, no. 6439 (2019): 458-464.
S. Lee, J. Gounley, A. Randles, and J.S. Vetter. "Performance portability study for massively parallel computational fluid dynamics application on scalable heterogeneous architectures." Journal of Parallel and Distributed Computing 129, no. 0743-7315 (2019): 1-13.
M. Dabagh, and A. Randles. "Role of deformable cancer cells on wall shear stress-associated-VEGF secretion by endothelium in microvasculature." PLOS ONE 14, no. 2 (2019): e0211418.
B. Feiger*, M. Vardhan*, J. Gounley, M. Mortensen, P. Nair, R. Chaudhury, D. Frakes, and A. Randles. "Suitability of lattice boltzmann inlet and outlet boundary conditions for simulating flow in patient-specific vasculature." International Journal for Numerical Methods in Biomedical Engineering (2019): e3198. *Equal Contribution.
2018
M. Vardhan, A. Das, J. Gouruev, and A. Randles. "Computational Fluid Modeling to Understand the Role of Anatomy in Bifurcation Lesion Disease." In 2018 IEEE 25th International Conference on High Performance Computing Workshops (HiPCW), 928-933. Bengaluru, India: IEEE 2018.

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