Publications

Ames, J., Rizzi, S., Insley, J., Patel, S., Hernández, B., Draeger, E. W., & Randles, A. (2019). Low-Overhead in Situ Visualization Using Halo Replay. In 2019 IEEE 9th Symposium on Large Data Analysis and Visualization Ldav 2019 (pp. 16–26). https://doi.org/10.1109/LDAV48142.2019.8944265

Herschlag, G., Gounley, J., Roychowdhury, S., Draeger, E. W., & Randles, A. (2019). Multi-physics simulations of particle tracking in arterial geometries with a scalable moving window algorithm. In Proceedings IEEE International Conference on Cluster Computing Iccc (Vol. 2019-September). https://doi.org/10.1109/CLUSTER.2019.8891041

Chen, K., Breitner, S., Wolf, K., Rai, M., Meisinger, C., Heier, M., … Schneider, A. (2019). Projection of Temperature-Related Myocardial Infarction in Augsburg, Germany: Moving on From the Paris Agreement on Climate Change. Deutsches Arzteblatt International, 116(31–32), 521–527. https://doi.org/10.3238/arztebl.2019.0521

Lee, S., Gounley, J., Randles, A., & Vetter, J. S. (2019). Performance portability study for massively parallel computational fluid dynamics application on scalable heterogeneous architectures. Journal of Parallel and Distributed Computing, 129, 1–13. https://doi.org/10.1016/j.jpdc.2019.02.005

Dabagh, M., Nair, P., Gounley, J., Frakes, D., Gonzalez, L. F., & Randles, A. (2019). Hemodynamic and morphological characteristics of a growing cerebral aneurysm. Neurosurg Focus, 47(1), E13. https://doi.org/10.3171/2019.4.FOCUS19195

Feiger, B., Vardhan, M., Gounley, J., Mortensen, M., Nair, P., Chaudhury, R., … Randles, A. (2019). Suitability of lattice Boltzmann inlet and outlet boundary conditions for simulating flow in image-derived vasculature. International Journal for Numerical Methods in Biomedical Engineering, 35(6), e3198. https://doi.org/10.1002/cnm.3198

Vardhan, M., Gounley, J., Chen, S. J., Kahn, A. M., Leopold, J. A., & Randles, A. (2019). The importance of side branches in modeling 3D hemodynamics from angiograms for patients with coronary artery disease. Scientific Reports, 9(1), 8854. https://doi.org/10.1038/s41598-019-45342-5

Grigoryan, B., Paulsen, S. J., Corbett, D. C., Sazer, D. W., Fortin, C. L., Zaita, A. J., … Miller, J. S. (2019). Multivascular networks and functional intravascular topologies within biocompatible hydrogels. Science (New York, N.Y.), 364(6439), 458–464. https://doi.org/10.1126/science.aav9750

Chen, K., Breitner, S., Wolf, K., Hampel, R., Meisinger, C., Heier, M., … KORA Study Group. (2019). Temporal variations in the triggering of myocardial infarction by air temperature in Augsburg, Germany, 1987-2014. European Heart Journal, 40(20), 1600–1608. https://doi.org/10.1093/eurheartj/ehz116

Gounley, J., Vardhan, M., & Randles, A. (2019). A Framework for Comparing Vascular Hemodynamics at Different Points in Time. Computer Physics Communications, 235, 1–8. https://doi.org/10.1016/j.cpc.2018.05.014

Gounley, J., Draeger, E. W., & Randles, A. (2019). Immersed Boundary Method Halo Exchange in a Hemodynamics Application. In Lecture Notes in Computer Science Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics (Vol. 11536 LNCS, pp. 441–455). https://doi.org/10.1007/978-3-030-22734-0_32

Vardhan, M., Shi, H., Gounley, J., Chen, S. J., Kahn, A., Leopold, J., & Randles, A. (2019). Correction to: Investigating the Role of VR in a Simulation-Based Medical Planning System for Coronary Interventions (Medical Image Computing and Computer Assisted Intervention – MICCAI 2019, LNCS 11768, 10.1007/978-3-030-32254-0_41) (Vol. 11768 LNCS, p. C1). https://doi.org/10.1007/978-3-030-32254-0_77

Gounley, J., Draeger, E. W., Oppelstrup, T., Krauss, W. D., Gunnels, J. A., Chaudhury, R., … Randles, A. (2019). Computing the ankle-brachial index with parallel computational fluid dynamics. Journal of Biomechanics, 82, 28–37. https://doi.org/10.1016/j.jbiomech.2018.10.007

Dabagh, M., & Randles, A. (2019). Role of deformable cancer cells on wall shear stress-associated-VEGF secretion by endothelium in microvasculature. PloS One, 14(2), e0211418. https://doi.org/10.1371/journal.pone.0211418

Hegele, L. A., Scagliarini, A., Sbragaglia, M., Mattila, K. K., Philippi, P. C., Puleri, D. F., … Randles, A. (2018). High-Reynolds-number turbulent cavity flow using the lattice Boltzmann method. Physical Review E, 98(4). https://doi.org/10.1103/PhysRevE.98.043302

Herschlag, G., Lee, S., Vetter, J. S., & Randles, A. (2018). GPU data access on complex geometries for D3Q19 lattice boltzmann method. In Proceedings 2018 IEEE 32nd International Parallel and Distributed Processing Symposium IPDPS 2018 (pp. 825–834). https://doi.org/10.1109/IPDPS.2018.00092

Vardhan, M., Das, A., Gouruev, J., & Randles, A. (2018). Computational fluid modeling to understand the role of anatomy in bifurcation lesion disease. In Proceedings 25th IEEE International Conference on High Performance Computing Workshops Hipcw 2018 (pp. 56–64). https://doi.org/10.1109/HiPCW.2018.8634225

Rafat, M., Stone, H. A., Auguste, D. T., Dabagh, M., Randles, A., Heller, M., & Rabinov, J. D. (2018). Impact of diversity of morphological characteristics and Reynolds number on local hemodynamics in basilar aneurysms. Aiche Journal, 64(7), 2792–2802. https://doi.org/10.1002/aic.16091

Randles, A., Frakes, D. H., & Leopold, J. A. (2017). Computational Fluid Dynamics and Additive Manufacturing to Diagnose and Treat Cardiovascular Disease. Trends in Biotechnology, 35(11), 1049–1061. https://doi.org/10.1016/j.tibtech.2017.08.008

Gounley, J., Vardhan, M., & Randles, A. (2017). A computational framework to assess the influence of changes in vascular geometry on blood flow. In Pasc 2017 Proceedings of the Platform for Advanced Scientific Computing Conference. https://doi.org/10.1145/3093172.3093227

Dabagh, M., Jalali, P., Butler, P. J., Randles, A., & Tarbell, J. M. (2017). Mechanotransmission in endothelial cells subjected to oscillatory and multi-directional shear flow. Journal of the Royal Society, Interface, 14(130), 20170185. https://doi.org/10.1098/rsif.2017.0185

Laurence, T. A., Ly, S., Fong, E., Shusteff, M., Randles, A., Gounley, J., & Draeger, E. (2017). Using stroboscopic flow imaging to validate large-scale computational fluid dynamics simulations. In Progress in Biomedical Optics and Imaging Proceedings of SPIE (Vol. 10076). https://doi.org/10.1117/12.2253319

Gounley, J., Draeger, E. W., & Randles, A. (2017). Numerical simulation of a compound capsule in a constricted microchannel. In Procedia computer science (Vol. 108, pp. 175–184). https://doi.org/10.1016/j.procs.2017.05.209

Gounley, J., Chaudhury, R., Vardhan, M., Driscoll, M., Pathangey, G., Winarta, K., … Randles, A. (2016). Does the degree of coarctation of the aorta influence wall shear stress focal heterogeneity? (pp. 3429–3432). Presented at the 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, Orlando, FL: IEEE.

Paternoster, L., Standl, M., Waage, J., Baurecht, H., Hotze, M., Strachan, D. P., … Weidinger, S. (2015). Multi-ancestry genome-wide association study of 21,000 cases and 95,000 controls identifies new risk loci for atopic dermatitis. Nature Genetics, 47(12), 1449–1456. https://doi.org/10.1038/ng.3424