Publications

J. Gounley, E.W. Draeger, and A. Randles. Immersed Boundary Method Halo Exchange in a Hemodynamics Application. In Lecture Notes in Computer Science – ICCS 2019, Edited by J. Rodrigues, P. Cardoso, A. Monteiro, R. Lam, V. Krzhizhanovskaya, M.H. Lees, J. Dongarra and P. Sloot. Vol. 11536. Cham: Springer International Publishing, 2019.

A Peters, A King, T Budnik, P McCarthy, and P Michaud. "Asynchronous task dispatch for high throughput computing for the eServer IBM Blue Gene." In Proceedings of the IEEE International Parallel and Distributed Processing Symposium. 2008.

M. Vardhan, A. Das, J. Gouruev, and A. Randles. "Computational Fluid Modeling to Understand the Role of Anatomy in Bifurcation Lesion Disease." In 2018 IEEE 25th International Conference on High Performance Computing Workshops (HiPCW), 928-933. Bengaluru, India: IEEE 2018.

D.F. Puleri, S. Roychowdhury, J. Ames, and A. Randles. "Computational framework to evaluate the hydrodynamics of cell scaffold geometries." In 42 Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC). IEEE 2020.

C. Tanade, S. Putney, and A. Randles. "Developing a Scalable Agent-Based Model of 3D Tumor Growth." In International Conference on Computational Science. London, UK: Springer, Cham 2022.

D.F. Puleri, A.X. Martin, and A. Randles. "Distributed Acceleration of Adhesive Dynamics Simulations." In EuroMPI/USA'22: 29th European MPI Users' Group Meeting, 37-45. Chattanooga TN USA: ACM 2022.

J Gounley, R Chaudhury, M Vardhan, M Driscoll, G Pathangey, K Winarta, J Ryan, D Frakes, and A Randles. "Does the degree of coarctation of the aorta influence wall shear stress focal heterogeneity?" In 2016 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), 3429-3432. Orlando, FL, USA: IEEE 2016.

A Randles, and L Zeger. "Efficient Resource Allocation for Broadcasting Multi-Slot Messages With Random Access with Capture." In Proceedings of IEEE Military Communications Conference (MILCOM). 2011.

S. Roychowdhury, E.W. Draeger, and A. Randles. "Establishing metrics to quantify underlying structure in vascular red blood cell distributions." In International Conference on Computational Science. London, UK: Springer, Cham 2022.

S. Roychowdhury, J. Gounley, and A. Randles. "Evaluating the Influence of Hemorheological Parameters on Circulating Tumor Cell Trajectory and Simulation Time." In The Platform for Advanced Scientific Computing (PASC) Conference , 1-10. Geneva, Switzerland: ACM 2020.

A Randles, M Driscoll, EW Draeger, and F Michor. "A Feasibility Study using Image-based Parallel Modeling for Treatment Planning." In Computing in Cardiology (CinC). Cambridge, MA 2014.

G. Herschlag, S. Lee, J. Vetter, and A. Randles. "GPU Data Access on Complex Geometries for D3Q19 Lattice Boltzmann Method." In IEEE International Parallel and Distributed Processing Symposium (IPDPS) , 825-834. Vancouver, British Columbia, Canada : IEEE 2018.

D. Puleri, S. Roychowdhury, P. Balogh, J. Gounley, E.W. Draeger, J. Ames, A. Adebiyi, S. Chidywagwai, B. Hernández, S. Lee et al. "High Performance Adaptive Physics Refinement to Enable Large-Scale Tracking of Cancer Cell Trajectory." In IEEE Cluster. 2022.

M. Vardhan, H. Shi, J. Gounley, S.Y. Chen, A. Kahn, J. Leopold, and A. Randles. "Investigating the role of VR in a simulation-based medical planning system for coronary interventions." In Medical Image Computing and Computer Assisted Interventions (MICCAI) 2019. Shenzhen, China 2019.

V Kale, A Randles, and WD Gropp. "Locality-optimized mixed static/dynamic scheduling for improving load balancing on SMPs." In ACM International Conference Proceeding Series, 115-116. Vol. 09-12-September-2014. 2014.

J. Ames, S. Rizzi, J. Insley, S. Patel, B. Hernández, and A. Randles. "Low-Overhead In Situ Visualization Using Halo Replay." In The 9th IEEE Symposium on Large Data Analysis and Visualization. Vancouver, British Columbia, Canada : IEEE 2019.

AP Randles, DG Rand, C Lee, G Morrisett, J Sircar, MA Nowak, and H Pfister. "Massively parallel model of extended memory use in evolutionary game dynamics." In Proceedings - IEEE 27th International Parallel and Distributed Processing Symposium, IPDPS 2013, 1217-1228. Boston, MA: IEEE 2013.

A Randles, EW Draeger, T Oppelstrup, L Krauss, and JA Gunnels. "Massively parallel models of the human circulatory system." In International Conference for High Performance Computing, Networking, Storage and Analysis, SC. Vol. 15-20-November-2015. 2015.

Y You, SL Song, H Fu, A Marquez, MM Dehnavi, K Barker, KW Cameron, AP Randles, and G Yang. "MIC-SVM: Designing a highly efficient support vector machine for advanced modern multi-core and many-core architectures." In Proceedings of the 28th IEEE International Parallel and Distributed Processing Symposium (IPDPS), 809-818. Phoenix, AZ: IEEE 2014.

M. Vardhan, J. Gounley, L. Hegele, E. Draeger, and A. Randles. "Moment representation in the lattice Boltzmann method on massively parallel hardware." In The International Conference for High Performance Computing, Networking, Storage, and Analysis (SC19). Denver, CO, USA : IEEE/ACM (accepted) 2019.

G. Herschlag, J. Gounley, S. Roychowdhury, E. Draeger, and A. Randles. "Multi-physics simulations of particle tracking in arterial geometries with a scalable moving window algorithm." In IEEE Cluster 2019. Albuquerque, New Mexico USA: IEEE 2019.

A Randles, S Melchionna, E Kaxiras, J Latt, J Sircar, M Bernaschi, M Bisson, and S Succi. "Multiscale simulation of cardiovascular flows on the IBM Bluegene/P: full heart-circulation system at red-blood cell resolution." In Proceedings of the 2010 ACM/IEEE International Conference for High Performance Computing, Networking, Storage, and Analysis (SC). 2010.

O Thorsen, K Jiang, A Peters, B Smith, H Lin, W Feng, and CP Sosa. "Parallel Genomic Sequence-Search on a Massively Parallel System." In ACM International Conference on Computing Frontiers. 2007.

M. Bishawi, M. Kaplan, S. Chidyagwai, J. Cappiello, A. Cherry, D. MacLeod, K. Gall, N. Evans, M. Kim, R. Shaha et al. "Patient- and Ventilator-Specific Modeling to Drive the Use and Development of 3D Printed Devices for Rapid Ventilator Splitting During the COVID-19 Pandemic." In International Conference on Computational Science. London, UK: Springer Lecture Notes in Computer Science (LNCS) 2022.

AP Randles, V Kale, J Hammond, W Gropp, and E Kaxiras. "Performance analysis of the lattice Boltzmann model beyond Navier-Stokes." In Proceedings - IEEE 27th International Parallel and Distributed Processing Symposium, IPDPS 2013, 1063-1074. 2013.